General features

Gene IDMYPE670
TypeCDS
From76451
To77092
Strand+
General name
Definitionpredicted translation factor Sua5/YciO/YrdC family protein
nt length642
aa length213
m.w.24813.27
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN362 Hypothetical protein 431707:433068884.6e-20
mgengi|12045114 conserved hypothetical protein [Mycoplasma genitalium]931.8e-21
mpulgi|15829084 conserved hypothetical protein [Mycoplasma pulmonis]818.9e-18
mmobgi|47459206 putative translation factor [Mycoplasma mobile 163K]793.6e-17
mmycgi|42560705 conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides SC]555.7e-10
mgalgi|31544343 conserved hypothetical [Mycoplasma gallisepticum R]1271.4e-31
uuregi|13358171 hypothetical protein [Ureaplasma urealyticum]1247.4e-31
phytgi|39938501 translation factor [Onion yellows phytoplasma]685.3e-14
bsubgi|16080748 alternate gene name: ipc-29d~similar to hypothetical proteins [Bacillus subtilis]506.0e-08
cacegi|15896136 Predicted translation factor (SUA5) [Clostridium acetobutylicum]682.0e-13
ecoligi|16131163 putative RNA-binding protein with unique protein fold [Escherichia coli K12]431.1e-05

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Sua5_yciO_yrdC1yrdC domain49-19921.44.7e-07

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553519predicted translation factor [Mycoplasma penetrans HF-2] 8671.7e-91
gi|13358171conserved hypothetical protein [Ureaplasma parvum serovar 6 str. ATCC 27818] 2838.6e-24
gi|171920600conserved hypothetical protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175... 2801.8e-23
gi|185178792conserved hypothetical protein [Ureaplasma urealyticum serovar 11 str. ATCC 3369... 2773.5e-23
gi|31544343conserved hypothetical protein [Mycoplasma gallisepticum R] 2641.1e-21
gi|13508101hemk family protein [Mycoplasma pneumoniae M129] 2121.2e-15
gi|12045114modification methylase, HemK family [synthetic Mycoplasma genitalium JCVI-1.0] 1977.9e-14
gi|162447073dsRNA binding, YrdC domain protein [Acholeplasma laidlawii PG-8A] 1896.0e-13
gi|167755050hypothetical protein CLORAM_00554 [Clostridium ramosum DSM 1402] 1798.8e-12
gi|118406895conserved hypothetical protein [Mycoplasma hominis] 1771.7e-11


Maintained by Jun Ishikawa