General features

Gene IDMYPE730
TypeCDS
From80780
To82618
Strand+
General name
Definitiondeoxyxylulose-5-phosphate synthase
nt length1839
aa length612
m.w.69550.73
COG[G] Carbohydrate transport and metabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mgalgi|31544557 Dxs [Mycoplasma gallisepticum R]3372.5e-94
phytgi|39938596 hypothetical protein [Onion yellows phytoplasma]312.5e-02
bsubgi|16079483 similar to hypothetical proteins [Bacillus subtilis]3023.3e-83
cacegi|15895347 Deoxyxylulose-5-phosphate synthase [Clostridium acetobutylicum]3553.0e-99
ecoligi|16128405 1-deoxy-D-xylulose-5-phosphate synthase [Escherichia coli K12]3224.5e-89

*mgal, Mycoplasma gallisepticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Transket_pyr1Transketolase, pyrimidine binding dom312-47892.21.8e-24

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553525deoxyxylulose-5-phosphate synthase [Mycoplasma penetrans HF-2] 29360.0e+00
gi|16800470tktB [Listeria innocua] 9368.7e-99
gi|116872796tktB [Listeria welshimeri serovar 6b str. SLCC5334] 9369.0e-99
gi|160915115hypothetical protein EUBDOL_01123 [Eubacterium dolichum DSM 3991] 9279.0e-98
gi|470959481-deoxy-D-xylulose-5-phosphate synthase [Listeria monocytogenes str. 1/2a F6854] 9035.5e-95
gi|168034051-deoxy-D-xylulose-5-phosphate synthase [Listeria monocytogenes F6900] 9035.8e-95
gi|1531744701-deoxy-D-xylulose-5-phosphate synthase [Listeria monocytogenes FSL N3-165] 9027.3e-95
gi|470937521-deoxy-D-xylulose-5-phosphate synthase [Listeria monocytogenes str. 4b H7858] 8892.1e-93
gi|469075911-deoxy-D-xylulose-5-phosphate synthase [Listeria monocytogenes str. 4b F2365] 8892.2e-93
gi|1531667521-deoxy-D-xylulose-5-phosphate synthase [Listeria monocytogenes FSL N1-017] 8882.6e-93


Maintained by Jun Ishikawa