General features

Gene IDMYPE7450
TypeCDS
From979752
To979006
Strand-
General name
DefinitionABC transporter ATP-binding protein
nt length747
aa length248
m.w.28084.06
COG[R] General function prediction only


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mgalgi|31544481 SufC [Mycoplasma gallisepticum R]2471.2e-67
bsubgi|16080323 similar to ABC transporter (ATP-binding protein) [Bacillus subtilis]2374.3e-64
cacegi|15896533 Iron-regulated ABC transporter ATPase subunit (SufC), VEG296 B.subtilis ortholog [Clostridium acetobutylicum]2069.9e-55
ecoligi|16129638 putative ATP-binding component of a transport system [Escherichia coli K12]1943.6e-51

*mgal, Mycoplasma gallisepticum; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter29-220109.79.7e-30

SMC_N1RecF/RecN/SMC N terminal domain5-226-106.30.00088

AAA1ATPase family associated with various c31-200-40.90.097

Peptidase_U571YabG peptidase U5753-244-234.50.25

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554201ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 12221.4e-132
gi|167756726hypothetical protein CLORAM_02267 [Clostridium ramosum DSM 1402] 6691.7e-68
gi|169350362hypothetical protein CLOSPI_01129 [Clostridium spiroforme DSM 1552] 6469.0e-66
gi|31544481SufC [Mycoplasma gallisepticum R] 6039.0e-61
gi|160913547hypothetical protein EUBDOL_00023 [Eubacterium dolichum DSM 3991] 5983.0e-60
gi|169190587FeS assembly ATPase SufC [Paenibacillus sp. JDR-2] 5966.1e-60
gi|42784166ABC transporter, ATP-binding protein [Bacillus cereus ATCC 10987] 5921.7e-59
gi|75760716ATP-dependent transporter sufC [Bacillus thuringiensis serovar israelensis ATCC ... 5911.9e-59
gi|30023023FeS assembly ATPase SufC [Bacillus cereus NVH0597-99] 5902.9e-59
gi|56964742ABC transporter ATP-binding protein [Bacillus clausii KSM-K16] 5893.3e-59


Maintained by Jun Ishikawa