General features

Gene IDMYPE8030
TypeCDS
From1080587
To1079214
Strand-
General namedeaD
DefinitionATP-dependent RNA helicase
nt length1374
aa length457
m.w.53539.81
COG[R] General function prediction only


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN443 deaD Probable RNA helicase MG308 homolog 537755:5365261712.4e-44
mgengi|12045164 ATP-dependent RNA helicase, putative [Mycoplasma genitalium]1872.4e-49
mpulgi|15828540 ATP-DEPENDENT RNA HELICASE [Mycoplasma pulmonis]1297.4e-32
mmobgi|47459115 DEAD-box ATP-dependent RNA helicase [Mycoplasma mobile 163K]1451.4e-36
mmycgi|42561004 ATP-dependent RNA helicase [Mycoplasma mycoides subsp. mycoides SC]2705.0e-74
mgalgi|31544708 SrmB [Mycoplasma gallisepticum R]2972.7e-82
uuregi|13358147 ATP-dependent RNA helicase [Ureaplasma urealyticum]3359.2e-94
phytgi|39938939 superfamily II DNA and RNA helicase [Onion yellows phytoplasma]1625.3e-42
bsubgi|16079569 similar to ATP-dependent RNA helicase [Bacillus subtilis]2123.2e-56
cacegi|15896262 ATP-dependent RNA helicase (superfamily II), YDBR B.subtilis ortholog [Clostridium acetobutylicum]1732.0e-44
ecoligi|16131054 cold-shock DeaD box ATP-dependent RNA helicase [Escherichia coli K12]1362.5e-33

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

DEAD1DEAD/DEAH box helicase23-191123.56.9e-34

Helicase_C1Helicase conserved C-terminal domain260-33686.31.1e-22

ResIII1Type III restriction enzyme, res subu19-1871.93.7e-05

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554258ATP-dependent RNA helicase [Mycoplasma penetrans HF-2] 20300.0e+00
gi|185178777ATP-dependent RNA helicase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] 7807.5e-81
gi|171920644ATP-dependent RNA helicase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 7734.1e-80
gi|13358147ATP-dependent RNA helicase [Ureaplasma parvum serovar 6 str. ATCC 27818] 7431.2e-76
gi|31544708SrmB [Mycoplasma gallisepticum R] 6722.1e-68
gi|125623300ATP-dependent RNA helicase [Lactococcus lactis subsp. cremoris MG1363] 5665.0e-56
gi|116511271Superfamily II DNA and RNA helicase [Lactococcus lactis subsp. cremoris SK11] 5656.2e-56
gi|169351091hypothetical protein CLOSPI_01870 [Clostridium spiroforme DSM 1552] 5583.7e-55
gi|160915042hypothetical protein EUBDOL_01050 [Eubacterium dolichum DSM 3991] 5477.5e-54
gi|50365089ATP-dependent RNA helicase [Mesoplasma florum L1] 5451.3e-53


Maintained by Jun Ishikawa