General features

Gene IDMYPE8120
TypeCDS
From1090861
To1089527
Strand-
General namethdF
Definitionthiophene and furan oxidation protein-related GTPase
nt length1335
aa length444
m.w.49726.29
COG[R] General function prediction only


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN008 thdF Thiophene and furan oxidation protein 9947:112752964.7e-82
mgengi|12044858 thiophene and furan oxidation protein (tdhF) [Mycoplasma genitalium]3131.6e-87
mpulgi|15828484 THIOPHENE AND FURAN OXIDATION PROTEIN THDF [Mycoplasma pulmonis]3088.6e-86
mmobgi|47459397 thiophene and furan oxidation protein [Mycoplasma mobile 163K]3364.1e-94
mmycgi|42560644 tRNA modification GTPase, TrmE [Mycoplasma mycoides subsp. mycoides SC]3259.7e-91
mgalgi|31544923 ThdF [Mycoplasma gallisepticum R]3233.4e-90
uuregi|13357574 GTP-binding protein in thiophene and furan oxidation [Ureaplasma urealyticum]3341.2e-93
phytgi|39939233 tRNA modification GTPase [Onion yellows phytoplasma]3111.2e-86
bsubgi|16081154 thdF [Bacillus subtilis]2977.3e-82
cacegi|15896965 Predicted GTPase, ThdF family [Clostridium acetobutylicum]3045.6e-84
ecoligi|16131574 tRNA modification GTPase [Escherichia coli K12]2301.2e-61

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

TrmE_N1GTP-binding protein TrmE N-terminus4-118199.49.9e-57

MMR_HSR11GTPase of unknown function216-332151.33e-42

Miro1Miro-like protein217-33237.55.2e-08

AIG11AIG1 family216-383-87.80.004

GTP_EFTU1Elongation factor Tu GTP binding doma213-366-85.50.012

NOG11Nucleolar GTP-binding protein 1 (NOG1279-332-13.10.12

Ras1Ras family217-366-102.80.15

VAR11Mitochondrial ribosomal protein (VAR190-378-221.60.29

Dynamin_N1Dynamin family218-331-42.80.29

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554267thiophene and furan oxidation protein-related GTPase [Mycoplasma penetrans HF-2] 17830.0e+00
gi|160914941hypothetical protein EUBDOL_00949 [Eubacterium dolichum DSM 3991] 7985.9e-83
gi|169351641hypothetical protein CLOSPI_02422 [Clostridium spiroforme DSM 1552] 7951.3e-82
gi|167755185hypothetical protein CLORAM_00690 [Clostridium ramosum DSM 1402] 7851.5e-81
gi|115252797putative trna modification gtpase protein [Spiroplasma citri] 7636.0e-79
gi|57651106GTP-binding protein [Staphylococcus aureus subsp. aureus USA300_TCH1516] 7412.3e-76
gi|70727675possible thiophene and furan oxidation protein [Staphylococcus haemolyticus JCSC... 7393.8e-76
gi|28379977thiophene and furan oxidation protein ThdF [Lactobacillus plantarum WCFS1] 7367.9e-76
gi|126651990tRNA modification GTPase [Bacillus sp. B14905] 7332.0e-75
gi|47459397thiophene and furan oxidation protein [Mycoplasma mobile 163K] 7322.1e-75


Maintained by Jun Ishikawa