General features

Gene IDMYPE8180
TypeCDS
From1097109
To1096291
Strand-
General name
Definitionintegrase/recombinase
nt length819
aa length272
m.w.32136.38
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
bsubgi|16079408 integrase/recombinase [Bacillus subtilis]846.8e-18
cacegi|15895336 Integrase/recombinase XerD family [Clostridium acetobutylicum]678.1e-13
ecoligi|16131663 tyrosine recombinase [Escherichia coli K12]845.9e-18

*bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Phage_integrase1Phage integrase family105-26497.06.4e-26

Phage_integr_N1Phage integrase, N-terminal SAM-like7-8211.20.007

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554273integrase [Mycoplasma penetrans HF-2] 12266.5e-133
gi|29349929integrase [Bacteroides thetaiotaomicron VPI-5482] 8521.3e-89
gi|42528242site-specific recombinase, phage integrase family [Treponema denticola ATCC 3540... 8502.6e-89
gi|189463338hypothetical protein BACCOP_04055 [Bacteroides coprocola DSM 17136] 8484.0e-89
gi|60681039putative phage integrase/recombinase [Bacteroides fragilis NCTC 9343] 8467.7e-89
gi|160914347hypothetical protein EUBDOL_00355 [Eubacterium dolichum DSM 3991] 8441.3e-88
gi|150006639integrase [Bacteroides vulgatus ATCC 8482] 8403.0e-88
gi|189463335hypothetical protein BACCOP_04052 [Bacteroides coprocola DSM 17136] 8385.0e-88
gi|153808173hypothetical protein BACCAC_02459 [Bacteroides caccae ATCC 43185] 8351.3e-87
gi|15902491integrase/recombinase, phage integrase family protein [Streptococcus pneumoniae ... 7893.1e-82


Maintained by Jun Ishikawa