General features

Gene IDMYPE8200
TypeCDS
From1100158
To1098599
Strand-
General namehsdS
Definitiontype I restriction-modification system S subunit
nt length1560
aa length519
m.w.60086.88
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpulgi|15829147 RESTRICTION MODIFICATION ENZYME SUBUNIT S1A [Mycoplasma pulmonis]521.7e-08
uuregi|13358009 type I restriction enzyme S protein (fragment) [Ureaplasma urealyticum]1512.2e-38
bsubgi|16078589 similar to hypothetical proteins [Bacillus subtilis]311.5e-01
ecoligi|16132169 specificity determinant for hsdM and hsdR [Escherichia coli K12]381.1e-03

*mpul, Mycoplasma pulmonis; uure, Ureaplasma urealyticum; bsub, Bacillus subtilis; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Methylase_S2Type I restriction modification DNA spe88-247, 351-513119.41.2e-32

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554275type I restriction-modification system S subunit [Mycoplasma penetrans HF-2] 24380.0e+00
gi|146319105type I restriction-modification system, S subunit [Streptococcus suis 05ZYH33] 7923.5e-82
gi|168485628type I restriction-modification system, S subunit [Streptococcus pneumoniae CDC1... 7726.5e-80
gi|169834387type I restriction-modification system, S subunit [Streptococcus pneumoniae Hung... 7701.1e-79
gi|148988251phosphoglycerate kinase [Streptococcus pneumoniae SP6-BS73] 7701.3e-79
gi|149005622type I restriction-modification system, S subunit [Streptococcus pneumoniae SP18... 7691.6e-79
gi|15900422type I restriction-modification system, S subunit [Streptococcus pneumoniae TIGR... 7672.9e-79
gi|182683453type I restriction-modification system, S subunit [Streptococcus pneumoniae CGSP... 7484.5e-77
gi|160914345hypothetical protein EUBDOL_00353 [Eubacterium dolichum DSM 3991] 7091.5e-72
gi|160914348hypothetical protein EUBDOL_00356 [Eubacterium dolichum DSM 3991] 6169.0e-62


Maintained by Jun Ishikawa