General features

Gene IDMYPE8210
TypeCDS
From1101637
To1100165
Strand-
General namehsdM
Definitiontype I restriction-modification system M subunit
nt length1473
aa length490
m.w.57311.97
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN342 hsdM Putative type I restriction enzyme MpnORFDP M protein 407861:4094921103.2e-26
mpulgi|15828904 RESTRICTION MODIFICATION ENZYME SUBUNIT M2 [Mycoplasma pulmonis]1051.2e-24
mmobgi|47459119 type I restriction enzyme m protein [Mycoplasma mobile 163K]1035.0e-24
mgalgi|31544886 HsdM [Mycoplasma gallisepticum R]681.7e-13
uuregi|13357655 type I restriction enzyme M protein (fragment) [Ureaplasma urealyticum]735.4e-15
phytgi|39939105 type I restriction-modification system methyltransferase subunit [Onion yellows phytoplasma]451.3e-06
bsubgi|16079275 similar to hypothetical proteins [Bacillus subtilis]311.4e-01
cacegi|15895576 DNA modification methyltransferase [Clostridium acetobutylicum]424.4e-05
ecoligi|16132170 DNA methylase M, host modification [Escherichia coli K12]1187.7e-28

*mpne, Mycoplasma pneumoniae; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

N6_Mtase1N-6 DNA Methylase142-453219.96.7e-63

MTS1Methyltransferase small domain164-343-90.40.06

UPF00201Putative RNA methylase family UPF0020171-353-66.20.14

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554276type I restriction-modification system M subunit [Mycoplasma penetrans HF-2] 24700.0e+00
gi|190150799type I restriction-modification system, M subunit [Actinobacillus pleuropneumoni... 17490.0e+00
gi|165976839Type I restriction-modification system M subunit [Actinobacillus pleuropneumonia... 17460.0e+00
gi|153094385type I site-specific deoxyribonuclease methyltransferase subunit [Mannheimia hae... 17410.0e+00
gi|139438844Hypothetical protein COLAER_01308 [Collinsella aerofaciens ATCC 25986] 16770.0e+00
gi|154175026Sec-independent protein translocase protein TatC [Campylobacter curvus 525.92] 16730.0e+00
gi|160914344hypothetical protein EUBDOL_00352 [Eubacterium dolichum DSM 3991] 16610.0e+00
gi|15902493type I restriction enzyme EcoEI M protein (M.EcoEI) [Streptococcus pneumoniae SP... 15811.1e-173
gi|15900423type I restriction-modification system, M subunit [Streptococcus pneumoniae TIGR... 15782.2e-173
gi|169833672type I restriction-modification system, M subunit [Streptococcus pneumoniae G54] 15772.9e-173


Maintained by Jun Ishikawa