General features

Gene IDMYPE8230
TypeCDS
From1103999
To1103478
Strand-
General namehsdR
Definitiontype I restriction-modification system R subunit, partial
nt length522
aa length173
m.w.19890.55
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
bsubgi|16078405 ykoU [Bacillus subtilis]282.3e-01

*bsub, Bacillus subtilis;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

HSDR_N1Type I restriction enzyme R protein N term7-11956.01.5e-13

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554278type I restriction-modification system R subunit, partial [Mycoplasma penetrans ... 8078.8e-85
gi|167628748type i restriction-modification system, r subunit [Heliobacterium modesticaldum ... 3202.2e-28
gi|167760904hypothetical protein CLOSCI_03292 [Clostridium scindens ATCC 35704] 3051.3e-26
gi|160914343hypothetical protein EUBDOL_00351 [Eubacterium dolichum DSM 3991] 3032.5e-26
gi|89210924Type III restriction enzyme, res subunit:Protein of unknown function DUF450:DEAD... 3023.2e-26
gi|145589317EcoEI R, C-terminal domain protein [Polynucleobacter sp. QLW-P1DMWA-1] 3013.5e-26
gi|158335392type I restriction-modification system, R subunit, putative [Acaryochloris marin... 2952.1e-25
gi|91217327hypothetical protein P700755_14280 [Psychroflexus torquis ATCC 700755] 2924.4e-25
gi|163756222hypothetical protein KAOT1_06782 [Kordia algicida OT-1] 2924.7e-25
gi|154174488type I restriction-modification system, R subunit [Campylobacter curvus 525.92] 2916.1e-25


Maintained by Jun Ishikawa