General features

Gene IDMYPE8250
TypeCDS
From1105471
To1104359
Strand-
General nametrmD
DefinitiontRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase
nt length1113
aa length370
m.w.42410.03
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN422 Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 509863:5087513131.8e-87
mgengi|12045151 conserved hypothetical protein [Mycoplasma genitalium]2961.7e-82
mpulgi|15829029 TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE [Mycoplasma pulmonis]3133.7e-87
mmobgi|47459275 tRNA-methyltransferase (5-methylaminomethyl-2-thiouridylate) [Mycoplasma mobile 163K]3071.3e-85
mmycgi|42560982 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Mycoplasma mycoides subsp. mycoides SC]3559.2e-100
mgalgi|31544324 TrmU [Mycoplasma gallisepticum R]3133.8e-87
uuregi|13357963 tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase [Ureaplasma urealyticum]3571.4e-100
phytgi|39938611 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase [Onion yellows phytoplasma]2689.1e-74
bsubgi|16079803 similar to hypothetical proteins [Bacillus subtilis]2253.7e-60
cacegi|15895501 TRNA 5-methylaminomethyl-2-thiouridylate)-methyltransferase, PP-loop ATPase [Clostridium acetobutylicum]2162.1e-57
ecoligi|49176082 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Escherichia coli K12]3031.6e-83

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

tRNA_Me_trans1tRNA methyl transferase2-364549.34.7e-162

CTP_synth_N1CTP synthase N-terminus2-163-216.00.1

ATP_bind_31PP-loop family3-217-102.00.16

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554279tRNA-(5-methylaminomethyl-2-thiouridylate) methyltransferase [Mycoplasma penetra... 19080.0e+00
gi|171920850tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Ureaplasma urealyt... 9005.3e-95
gi|110005181probable trna 5-methylaminomethyl-2-thiouridylate-methyltransferase protein [Spi... 8853.2e-93
gi|50365230tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase [Mesoplasma florum L... 8782.1e-92
gi|42560982tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Mycoplasma mycoide... 8575.3e-90
gi|83319617tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Mycoplasma caprico... 8512.9e-89
gi|195867812tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Ureaplasma urealyt... 8477.9e-89
gi|13357963tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Ureaplasma parvum ... 8461.1e-88
gi|188159353tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Mycoplasma mycoide... 8441.8e-88
gi|167756778hypothetical protein CLORAM_02327 [Clostridium ramosum DSM 1402] 8371.4e-87


Maintained by Jun Ishikawa