General features

Gene IDMYPE8420
TypeCDS
From1124451
To1122982
Strand-
General namelysS
Definitionlysyl-tRNA synthetase
nt length1470
aa length489
m.w.57292.77
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN277 lysS Lysyl-tRNA synthetase 326856:3283255062.6e-145
mgengi|12044988 lysyl-tRNA synthetase (lysS) [Mycoplasma genitalium]4947.6e-142
mpulgi|15828873 LYSYL-TRNA SYNTHETASE (LYSINE--TRNA LIGASE) (LYSRS) [Mycoplasma pulmonis]4701.9e-134
mmobgi|47458879 lysyl-tRNA synthetase [Mycoplasma mobile 163K]5132.1e-147
mmycgi|42560629 Lysine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC]5124.8e-147
mgalgi|31544279 LysU [Mycoplasma gallisepticum R]5424.0e-156
uuregi|13357618 lysyl-tRNA synthetase [Ureaplasma urealyticum]5687.0e-164
phytgi|39939075 lysyl-tRNA synthetase class II [Onion yellows phytoplasma]4454.4e-127
bsubgi|16077150 lysyl-tRNA synthetase [Bacillus subtilis]4831.0e-137
cacegi|15896444 Lysyl-tRNA synthetase [Clostridium acetobutylicum]4608.9e-131
ecoligi|16131955 lysyl-tRNA synthetase [Escherichia coli K12]3871.2e-108

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

tRNA-synt_21tRNA synthetases class II (D, K and N)147-487357.82e-104

tRNA_anti1OB-fold nucleic acid binding domain57-13155.12.7e-13

tRNA-synt_2b1tRNA synthetase class II core domain (G171-323-55.00.11

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554296lysyl-tRNA synthetase [Mycoplasma penetrans HF-2] 24460.0e+00
gi|188524159lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] 14393.2e-157
gi|171920720lysyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 14358.5e-157
gi|171920411lysyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813] 14195.8e-155
gi|13357618lysyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818] 14195.8e-155
gi|31544279LysU [Mycoplasma gallisepticum R] 13381.5e-145
gi|13508016lysyl-tRNA synthetase [Mycoplasma pneumoniae M129] 13022.1e-141
gi|160916179hypothetical protein EUBDOL_02206 [Eubacterium dolichum DSM 3991] 12951.4e-140
gi|83319783lysyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum ATCC 27343] 12889.2e-140
gi|22536914lysyl-tRNA synthetase [Streptococcus agalactiae H36B] 12852.1e-139


Maintained by Jun Ishikawa