General features

Gene IDMYPE8580
TypeCDS
From1155554
To1156459
Strand+
General namepotB
Definitionspermidine/putrescine transport system permease PotB
nt length906
aa length301
m.w.33250.52
COG[E] Amino acid transport and metabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN056 potB Spermidine/putrescine transport system permease protein potB homolog 72088:729481664.6e-43
mgengi|12044893 spermidine/putrescine ABC transporter, permease protein (potB) [Mycoplasma genitalium]1718.3e-45
mpulgi|15828895 SPERMIDINE/PUTRESCINE ABC TRANSPORTER PERMEASE PROTEIN POTB [Mycoplasma pulmonis]1403.3e-35
mmobgi|47458884 spermidine/putrescine ABC transporter permease protein [Mycoplasma mobile 163K]1302.8e-32
mmycgi|42560775 spermidine/putrescine ABC transporter permease component [Mycoplasma mycoides subsp. mycoides SC]966.0e-22
mgalgi|31544672 PotB [Mycoplasma gallisepticum R]2355.9e-64
uuregi|13357665 spermidine/putrescine transport system permease [Ureaplasma urealyticum]2541.3e-69
phytgi|39939146 ABC-type spermidine/putrescine transport system, permease component I [Onion yellows phytoplasma]1054.7e-25
bsubgi|16079926 integral membrane protein [Bacillus subtilis]517.4e-08
cacegi|15894126 ABC-type spermidine/putrescine transport system, permease component I [Clostridium acetobutylicum]954.2e-21
ecoligi|16129088 spermidine/putrescine ABC transporter membrane component [Escherichia coli K12]1148.0e-27

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

BPD_transp_11Binding-protein-dependent transport s79-28644.54e-10

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554312spermidine/putrescine transport system permease PotB [Mycoplasma penetrans HF-2] 11746.6e-127
gi|185178767ABC transporter, permease protein [Ureaplasma urealyticum serovar 11 str. ATCC 3... 5411.9e-53
gi|171920659ABC transporter, permease protein [Ureaplasma urealyticum serovar 9 str. ATCC 33... 5402.2e-53
gi|13357665spermidine/putrescine transport system permease [Ureaplasma parvum serovar 6 str... 5277.7e-52
gi|171920498spermidine/putrescine transport system permease [Ureaplasma parvum serovar 1 str... 5261.0e-51
gi|31544672PotB [Mycoplasma gallisepticum R] 4765.8e-46
gi|13507795spermidine/putrescine transport system permease [Mycoplasma pneumoniae M129] 3422.0e-30
gi|12044893spermidine/putrescine ABC transporter, permease protein, putative [synthetic Myc... 3386.3e-30
gi|54020582spermidine/putrescine transport system permease [Mycoplasma hyopneumoniae 232] 2973.6e-25
gi|71893894spermidine/putrescine ABC transporter permease protein [Mycoplasma hyopneumoniae... 2874.7e-24


Maintained by Jun Ishikawa