General features

Gene IDMYPE8760
TypeCDS
From1180892
To1179372
Strand-
General nameoppD
Definitionoligopeptide ABC transporter ATP-binding protein
nt length1521
aa length506
m.w.57119.14
COG[R] General function prediction only


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN217 oppD Oligopeptide transport ATP-binding protein oppD 268204:2694754686.2e-134
mgengi|12044931 oligopeptide ABC transporter, ATP-binding protein (oppD) [Mycoplasma genitalium]4785.9e-137
mmycgi|42560734 Oligopeptide ABC transporter, ATP-binding component [Mycoplasma mycoides subsp. mycoides SC]2621.2e-71
mgalgi|31544718 DppD [Mycoplasma gallisepticum R]4241.7e-120

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter51-372193.65.4e-55

oligo_HPY1Oligopeptide/dipeptide transporter, C375-44093.19.5e-25

SMC_N1RecF/RecN/SMC N terminal domain40-376-137.40.17

YkyA1Putative cell-wall binding lipoprotei117-275-114.60.48

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554329oligopeptide ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 23840.0e+00
gi|12044931oligopeptide ABC transporter, ATP-binding protein [synthetic Mycoplasma genitali... 11803.4e-127
gi|31544718DppD [Mycoplasma gallisepticum R] 11221.7e-120
gi|26554005oligopeptide transport ATP-binding protein OppD [Mycoplasma penetrans HF-2] 10551.1e-112
gi|13507956oligopeptide transport ATP-binding protein OppD [Mycoplasma pneumoniae M129] 8471.4e-88
gi|168335431oligopeptide ABC transporter ATP-binding protein [Epulopiscium sp. 'N.t. morphot... 8311.0e-86
gi|66880304COG0444: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase compone... 7565.2e-78
gi|172058063oligopeptide/dipeptide ABC transporter, ATPase subunit [Exiguobacterium sibiricu... 7036.7e-72
gi|187605721oligopeptide/dipeptide ABC transporter, ATPase subunit [Exiguobacterium sp. AT1b... 6921.4e-70
gi|138894366oligopeptide/dipeptide ABC transporter, ATPase subunit [Geobacillus sp. G11MC16] 6911.6e-70


Maintained by Jun Ishikawa