General features

Gene IDMYPE8890
TypeCDS
From1196921
To1194933
Strand-
General nameuvrB
Definitionexcinuclease ABC subunit B
nt length1989
aa length662
m.w.76575.98
COG[L] Replication, recombination and repair


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN211 uvrB UvrABC system protein B 259641:2616146458.5e-02
mgengi|12044925 excinuclease ABC subunit B (uvrB) [Mycoplasma genitalium]6772.2e-02
mpulgi|15828567 EXCINUCLEASE ABC SUBUNIT B [Mycoplasma pulmonis]6683.5e-18
mmobgi|47459407 excinuclease ABC helicase subunit B [Mycoplasma mobile 163K]6826.0e-24
mmycgi|42561460 Excinuclease ABC subunit B [Mycoplasma mycoides subsp. mycoides SC]7055.2e-23
mgalgi|31544242 UvrB [Mycoplasma gallisepticum R]7561.2e-18
uuregi|13357677 excinuclease ABC subunit B [Ureaplasma urealyticum]7496.5e-15
phytgi|39938918 helicase subunit of the DNA excision repair complex [Onion yellows phytoplasma]6377.5e-04
bsubgi|16080570 excinuclease ABC (subunit B) [Bacillus subtilis]6732.2e-01
cacegi|15893793 Excinuclease ABC subunit B (helicase subunit of the DNA excision repair complex) [Clostridium acetobutylicum]6322.3e-13
ecoligi|16128747 excinuclease ABC subunit B [Escherichia coli K12]6115.3e-176

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Helicase_C1Helicase conserved C-terminal domain469-55066.01.4e-16

UVR1UvrB/uvrC motif625-66042.12.2e-09

ResIII1Type III restriction enzyme, res subu14-40325.14.2e-07

DEAD1DEAD/DEAH box helicase18-409-32.10.0086

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554342excinuclease ABC subunit B [Mycoplasma penetrans HF-2] 31700.0e+00
gi|185178702excinuclease ABC, B subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] 18410.0e+00
gi|31544242UvrB [Mycoplasma gallisepticum R] 18410.0e+00
gi|188592540excinuclease ABC, B subunit [Ureaplasma urealyticum serovar 10] 18410.0e+00
gi|171920764excinuclease ABC, B subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 18400.0e+00
gi|188024297excinuclease ABC, B subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] 18370.0e+00
gi|188568726excinuclease ABC, B subunit [Ureaplasma urealyticum serovar 2] 18360.0e+00
gi|13357677excinuclease ABC, B subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] 17760.0e+00
gi|160914503hypothetical protein EUBDOL_00509 [Eubacterium dolichum DSM 3991] 17580.0e+00
gi|83319947excinuclease ABC, B subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] 17230.0e+00


Maintained by Jun Ishikawa