General features

Gene IDMYPE9160
TypeCDS
From1227452
To1226940
Strand-
General nameinfC
Definitiontranslation initiation factor IF3
nt length513
aa length170
m.w.19631.90
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN115 infC Translation initiation factor IF-3 150643:1512481431.1e-36
mgengi|12045048 translation initiation factor 3 (infC) [Mycoplasma genitalium]1461.3e-37
mpulgi|15828730 TRANSLATION INITIATION FACTOR IF-3 [Mycoplasma pulmonis]1262.3e-31
mmobgi|47459464 translation initiation factor if-3 [Mycoplasma mobile 163K]1231.6e-30
mmycgi|42560771 translation initiation factor IF-3 [Mycoplasma mycoides subsp. mycoides SC]1255.5e-31
mgalgi|31544561 InfC/IF-3 [Mycoplasma gallisepticum R]1384.5e-35
uuregi|13357787 translation initiation factor IF3 [Ureaplasma urealyticum]1731.3e-45
phytgi|39939230 translation initiation factor IF3 [Onion yellows phytoplasma]754.1e-16
bsubgi|16079939 initiation factor IF-3 [Bacillus subtilis]1073.8e-25
cacegi|15895628 Translation initiation factor IF3 [Clostridium acetobutylicum]1199.1e-29
ecoligi|16129674 translation initiation factor IF-3 [Escherichia coli K12]921.1e-20

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

IF3_N1Translation initiation factor IF-3, N-term2-76112.91.1e-30

IF3_C1Translation initiation factor IF-3, C-term81-17057.55.2e-14

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554368translation initiation factor IF3 [Mycoplasma penetrans HF-2] 6778.2e-70
gi|13357787translation initiation factor IF-3 [Ureaplasma parvum serovar 3 str. ATCC 700970... 3462.2e-31
gi|13507854translation initiation factor IF-3 [Mycoplasma pneumoniae M129] 3211.7e-28
gi|2506777Translation initiation factor IF-3 3192.8e-28
gi|12045048translation initiation factor IF-3 [synthetic Mycoplasma genitalium JCVI-1.0] 3192.9e-28
gi|56421253translation initiation factor IF-3 [Geobacillus kaustophilus HTA426] 2727.6e-23
gi|31544561InfC/IF-3 [Mycoplasma gallisepticum R] 2701.6e-22
gi|159901151translation initiation factor IF-3 [Herpetosiphon aurantiacus ATCC 23779] 2682.4e-22
gi|50365004translation initiation factor IF-3 [Mesoplasma florum L1] 2663.9e-22
gi|29427472Translation initiation factor IF-3 2611.6e-21


Maintained by Jun Ishikawa