General features

Gene IDMYPE960
TypeCDS
From122272
To121160
Strand-
General name
DefinitionABC transporter ATP-binding protein, paralog family
nt length1113
aa length370
m.w.43189.02
COG[Q] Secondary metabolites biosynthesis, transport and catabolism


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN334 bcrA Hypothetical ABC transporter ATP-binding protein 395165:3961452102.8e-56
mmycgi|42560870 ABC transporter, ATP-binding component (Na+?) [Mycoplasma mycoides subsp. mycoides SC]2134.3e-57
bsubgi|16080917 similar to ABC transporter (ATP-binding protein) [Bacillus subtilis]1254.0e-30
cacegi|15893560 ABC transporter ATP-binding protein [Clostridium acetobutylicum]1422.9e-35

*mpne, Mycoplasma pneumoniae; mmyc, Mycoplasma mycoides; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

ABC_tran1ABC transporter84-263165.91.2e-46

SMC_N1RecF/RecN/SMC N terminal domain73-266-135.70.13

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26553549ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 17170.0e+00
gi|26553757ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 7204.1e-74
gi|31544580CcmA [Mycoplasma gallisepticum R] 5564.5e-55
gi|31544307CcmA [Mycoplasma gallisepticum R] 5313.5e-52
gi|26553809ABC transporter ATP-binding protein [Mycoplasma penetrans HF-2] 5242.3e-51
gi|167970997ABC transporter [Ureaplasma parvum serovar 6 str. ATCC 27818] 5206.5e-51
gi|15828667ABC TRANSPORTER ATP-BINDING PROTEIN [Mycoplasma pulmonis] 5152.4e-50
gi|13357650ABC transporter [Ureaplasma parvum serovar 14 str. ATCC 33697] 5143.7e-50
gi|71894154ABC transporter ATP-binding protein [Mycoplasma synoviae 53] 5091.2e-49
gi|167941093ABC transporter [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 5062.8e-49


Maintained by Jun Ishikawa