General features

Gene IDMYPE9740
TypeCDS
From1296154
To1295429
Strand-
General namehisT
DefinitiontRNA pseudouridine synthase
nt length726
aa length241
m.w.28315.54
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN196 hisT tRNA pseudouridine synthase A 235805:2365361623.9e-42
mgengi|12045035 pseudouridylate synthase I (hisT) [Mycoplasma genitalium]1785.1e-47
mmycgi|42561241 pseudouridylate synthase I [Mycoplasma mycoides subsp. mycoides SC]1041.6e-24
mgalgi|31544780 TruA [Mycoplasma gallisepticum R]1655.7e-43
uuregi|13358100 pseudouridylate synthase I [Ureaplasma urealyticum]1984.7e-53
phytgi|39938715 pseudouridylate synthase [Onion yellows phytoplasma]1131.7e-27
bsubgi|16077216 pseudouridylate synthase I [Bacillus subtilis]1261.3e-30
cacegi|15896350 Pseudouridylate synthase, TRUA [Clostridium acetobutylicum]1452.6e-36
ecoligi|16130253 tRNA pseudouridine synthase A [Escherichia coli K12]882.7e-19

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

PseudoU_synth_12tRNA pseudouridine synthase5-104, 142-241141.42.8e-39

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554422tRNA pseudouridine synthase [Mycoplasma penetrans HF-2] 10625.2e-114
gi|13358100tRNA pseudouridine synthase A [Ureaplasma parvum serovar 14 str. ATCC 33697] 4612.5e-44
gi|171920798tRNA pseudouridine synthase A [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 4593.9e-44
gi|171920141tRNA pseudouridine synthase A [Ureaplasma parvum serovar 6 str. ATCC 27818] 4585.3e-44
gi|12045035tRNA pseudouridine synthase A [synthetic Mycoplasma genitalium JCVI-1.0] 4343.2e-41
gi|13507935pseudouridylate synthase I [Mycoplasma pneumoniae M129] 4146.6e-39
gi|31544780TruA [Mycoplasma gallisepticum R] 3931.6e-36
gi|188039728tRNA pseudouridine synthase A [Ureaplasma urealyticum serovar 8] 3734.3e-34
gi|66880034COG0101: Pseudouridylate synthase [Mycoplasma genitalium G-37] 3707.9e-34
gi|164688053hypothetical protein CLOBAR_01698 [Clostridium bartlettii DSM 16795] 3572.6e-32


Maintained by Jun Ishikawa