General features

Gene IDMYPE9940
TypeCDS
From1316942
To1316568
Strand-
General namerpsM
Definitionribosomal protein S13
nt length375
aa length124
m.w.14175.51
COG[J] Translation, ribosomal structure and biogenesis


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
mpneMPN189 rpsM 30S ribosomal protein S13 230703:2310771821.7e-48
mgengi|12045028 ribosomal protein S13 (rpS13) [Mycoplasma genitalium]1821.3e-48
mpulgi|15829034 30S RIBOSOMAL PROTEIN S13 [Mycoplasma pulmonis]1552.7e-40
mmobgi|47459094 30S ribosomal protein s13 [Mycoplasma mobile 163K]1721.4e-45
mmycgi|42561248 30S RIBOSOMAL PROTEIN S13 [Mycoplasma mycoides subsp. mycoides SC]1552.9e-40
mgalgi|31544834 RpsM [Mycoplasma gallisepticum R]2014.4e-54
uuregi|13357815 ribosomal protein S13 [Ureaplasma urealyticum]1875.2e-50
phytgi|39938711 ribosomal protein S13 [Onion yellows phytoplasma]1482.4e-38
bsubgi|16077209 ribosomal protein S13 [Bacillus subtilis]1663.0e-43
cacegi|15896358 Ribosomal protein S13 [Clostridium acetobutylicum]1471.3e-37
ecoligi|16131177 30S ribosomal protein S13 [Escherichia coli K12]1502.5e-38

*mpne, Mycoplasma pneumoniae; mgen, Mycoplasma genitalium; mpul, Mycoplasma pulmonis; mmob, Mycoplasma mobile; mmyc, Mycoplasma mycoides; mgal, Mycoplasma gallisepticum; uure, Ureaplasma urealyticum; phyt, ; bsub, Bacillus subtilis; cace, Clostridium acetobutylicum; ecoli, Escherichia coli K-12;

Pfam search result


ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_S131Ribosomal protein S13/S183-108203.17.3e-58

BLAST search result (top 10 hits)

IDDescriptionScoreE-value
gi|26554442ribosomal protein S13 [Mycoplasma penetrans HF-2] 4931.9e-48
gi|31544834RpsM [Mycoplasma gallisepticum R] 4232.0e-40
gi|13357815ribosomal protein S13p/S18e [Ureaplasma parvum serovar 6 str. ATCC 27818] 3936.0e-37
gi|167941432ribosomal protein S13p/S18e [Ureaplasma urealyticum serovar 9 str. ATCC 33175] 3936.4e-37
gi|13507928ribosomal protein S13 [Mycoplasma pneumoniae M129] 3892.0e-36
gi|12045028ribosomal protein S13 [synthetic Mycoplasma genitalium JCVI-1.0] 3839.6e-36
gi|14837778430S ribosomal protein S13 [Mycoplasma agalactiae PG2] 3731.4e-34
gi|12665430430S ribosomal protein S13 [Lysinibacillus sphaericus C3-41] 3561.2e-32
gi|4745909430S ribosomal protein s13 [Mycoplasma mobile 163K] 3561.4e-32
gi|5696195730S ribosomal protein S13 [Bacillus clausii KSM-K16] 3551.9e-32


Maintained by Jun Ishikawa